MOHAMMAD SUFIAN BADAR, PhD
1055 W. Blaine Street, Riverside, CA, 92507, USA, +13182783121
[email protected],
[email protected],
https://orcid.org/0000-0003-2390-2667
https://scholar.google.com/citations?user=XKJDIbgAAAAJ&hl=en
https://www.researchgate.net/profile/Mohammad_Badar2
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Research Ongoing:
Face Detection, Recognition and Emotion Recognition by Deep Neural Network
We have developed an algorithm for Face Detection, Recognition, and Emotion Recognition using Deep Learning. Now we have developed a device by using four different types of biosensors, correlated with the emotion recognition algorithm and human physiology of the human body that can measure the temperature, skin conductivity, ECG/oxygen concentration in the blood, measuring the amount of motion, and amount of stress hormones in the body non-invasively.
Prediction and Prognosis of Breast Cancer by Machine Learning
We are designing a model using an algorithm developed using Machine Learning.
Our research proposes a model developed by different techniques of machine learning. It is a hybrid model of ensemble learning which combines the predictions of multiple models, leading to an improvement of the performance of the models. Ensemble learning uses multiple machine learning methods to try to make better predictions on a dataset. The predictions of these models are then combined in the ensemble model to make a final prediction.
Postdoctoral Fellowship (2014–2015): Bishop Molecular Modeling Lab, Louisiana Tech University, Ruston, LA, USA. Worked to develop techniques for on demand comparative genomics studies of mononucleosomes using high throughput – high performance all atom molecular dynamics simulations
Specialization:
Software | Bioinformatics Software | Molecular Biology Tools | Material Characterization |
Linux/Centos | NGS Analysis Tools for WGS, RNA-Seq, WES, WGBS, ChIP-Seq | qPCR/RNAseq | XRF, FTIR |
R, Bioconductor | Gene Prediction Tool: GENSCAN, GRAIL | DNA gels Cloning, | XRD, SEM |
Perl, C++ | Sequence Similarity and Alignment Tool: BLAST, FASTA, Clustal W, T-Coffee | Cloning | EDAX, MIP |
Bio-python | Phylogenetic Prediction: DNAPARS, DNADIST, DNAML | Plasmid preps | 3D Microtomography |
Matlab | NEIGHBOUR, PROTPRAS, PRODIST | Secretome Analysis | ADMET |
Badar, M.S., Kupwade-Patil, K., Bernal, S. A., Provis, J. L., Allouche, E. N., Accelerated Carbonation Induces Corrosion of Steel Rebars in Low and High Calcium Fly Ash Geopolymer Concretes, Construction & Building Materials, Vol 61, No 49, pp. 79-89, 2014
Kupwade-Patil, K, Allouche, E.N, C.A. Watts and M.S. Badar, Selected Studies on Durability of Geopolymer Concretes, ASTM Special Technical Publication (STP), 2012
K. Kupwade-Patil*, M.S. Badar, Erez N Allouche, Evaluation of Geopolymer Concretes at Elevated Temperatures, Proceedings of the American Ceramic Society (ICACC-FS1- 019-2013), Daytona Beach, FL,USA, Feb 01, 2013
Kupwade-Patil*, M.S. Badar, E.N. Allouche, Ceramic Engineering and Science Proceedings Volume 34, Issue 10 - Developments in Strategic Materials and Computational Design
IV, ISBN: 978-1-118-80727-9, E-Book, Wiley, 336 pages, Nov, 2013
Analyzing co-clustered and functionally connected human gene pairs, Mohammad Badar, https://bioinformatics.pulsusconference.com/2018 2nd World Congress on Bioinformatics & System Biology, Dubai, UAE, October 15-16, 2018
Selected durability studies of geopolymer concrete with respect to carbonation, elevated temperature, and microbial induced corrosion, Mohammad Sufian Badar, ProQuest Dissertations And Theses; Thesis (Ph.D.)--Louisiana Tech University, Ruston, LA, USA 2014.; Publication Number: AAT 3662218; ISBN: 9781321535105; Source: Dissertation Abstracts International, Volume: 76-05(E), Section: B.; 141 p. Nov 2015
Toward Online Comparative Genomics of Mononucleosomes, T. C. Badar, M. S., Pereddy, V., Mahadasyam, P., Bishop, Aug 2014, EPSCoR 2014, Baton Rouge, LA
The Evaluation of Geopolymer Concrete against Microbial Induced Corrosion (MIC) Allouche, EN Badar, M. S., Montes, C., Minullina, R., Hindmarsh, P. L., Lvov, Y., Allouche UCT (Underground Construction Technology) 2014, Houston, TX, George R. Brown, 2014
MS Badar, Analyzing co-clustered and functionally connected human gene pairs, 2nd World Congress on Bioinformatics & System Biology, Dubai, UAE, October 15-16, 2018
Mohammad Sufian Badar, Alain Abran, Professor,
Department of Software and IT Engineering
École de technologie supérieure, Canada, Prediction and Prognosis on Breast Cancer by Machine Learning, 3rd Annual Congress on Bacterial, Viral and Infectious Diseases, dated June 18-19, 2020, Dubai, UAE
Presentations
Badar, M. S., Montes, C., Hindmarsh, P. L., Allouche, E. N., Resistance of Geopolymer to Microbial Induced Corrosion, ASM2013, 113th General Meeting, American Society of Microbiology, Denver, Colorado, May 18-21, 2013
This work was also presented at: 87th Annual Meeting of Louisiana Academy of Sciences (LAS); Grambling State University, Mar 9, 2013
UCT (Underground Construction Technology) 2014, Houston, TX, Jan. 28 – 30, 2014
Badar, M. S., An Effective Instructor, American Society for Engineering Education (ASEE), Embry-Riddle Aeronautical University Daytona Beach, Florida, August 6-8, 2017
Badar, M. S., Pereddy, V., Mahadasyam, P., Bishop, T. C., Toward Online Comparative Genomics of Mononucleosomes, LA-SiGMA, Baton Rouge, LA, May 5, 2014 (Also at EPSCoR 2014, Baton Rouge, LA, Aug 18, 2014
Invited Talk/Speaker
1. Bioinformatics search tools, BLAST, Guru Nanak Dev University, Amritsar, Punjab, India, Nov 3, 2007
2. Internet of Things: Face and Emotion Detection, Maulana Azad National Urdu University, Hyderabad, India, Nov 27, 2019
3. Association of Muslim Professionals (AMP) Online Career Guidance Seminar, July 20-30th, 2020
4. Estimation of macro human emotions using non-invasive Bio-sensors.The 2nd International Conference on Networks and Cryptology (NetCrypt), School of
Computer & Systems Sciences, Jawaharlal Nehru University, New Delhi, India, 4-6 Dec, 2020
Book/Chapter Authoring
Teaching Faculty (Senior), (2016-2020): Department of Bioengineering, University of California, Riverside, CA, USA
Lecturer (2006-2008): Bioinformatics, Guru Nanak Dev, University, Amritsar, India
Head (2005-2006): Bioinformatics, Singhania University, Pacheri Badi, Rajasthan, India
Courses taught: Introduction to Bioengineering, Quantitative Biochemistry, Senior Design, Dynamics of Biological Systems Biomaterials, Biomedical Imaging, Optical Imaging, Introduction to Bioinformatics, Computational Method for Sequence Analysis, Relational Database Management System, Python, Computer Application & Bioinformatics, Drug Design & Gene Therapy, Data Mining, Artificial Intelligence and Next Generation Sequencing, Computational Biology, Machine Learning, Gene Expression and Microarray Technology
Lab Course: 3D Print, Computational Modeling Software, Bioinformatics software
Research Guidance: PG Students (10), Undergraduate Students (12)
Agriculture Engineer (1996 – 2002): Ministry of Defense & Aviation, Riyadh, Saudi Arabia,
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